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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs4246955 chr11:49349513 G/A FOLH1B chr11:89372395-89431886:+ -0.35 -6.12 1.95E-9 Box Plot
THCA rs4247200 chr3:148865679 C/T LOC93622 chr4:6675818-6677774:+ -0.3 -6.08 2.45E-9 Box Plot
THCA rs4249603 chr5:49452839 G/T LOC647121 chr1:121260910-121313686:+ -0.35 -7.63 1.3E-13 Box Plot
THCA rs4257782 chr5:45750394 A/G LOC647121 chr1:121260910-121313686:+ 0.37 7.88 2.17E-14 Box Plot
THCA rs4259174 chr5:46074453 G/T LOC647121 chr1:121260910-121313686:+ -0.35 -7.58 1.75E-13 Box Plot
THCA rs4261285 chr11:49570493 A/G FOLH1B chr11:89372395-89431886:+ -0.35 -6.41 3.48E-10 Box Plot
THCA rs4263507 chr5:46088123 G/T LOC647121 chr1:121260910-121313686:+ -0.35 -7.59 1.68E-13 Box Plot
THCA rs4269044 chr3:28743873 G/T NPHS1 chr19:36316866-36360189:- -0.31 -6.17 1.44E-9 Box Plot
THCA rs4273593 chr5:151678320 T/C FILIP1L chr3:99548985-99833357:- -0.22 -6.27 7.92E-10 Box Plot
THCA rs4273946 chr9:100547627 G/C BMPR1A chr10:88516358-88692595:+ -0.24 -6.26 8.71E-10 Box Plot
THCA rs4273946 chr9:100547627 G/C CLDN2 chrX:106143394-106174091:+ 0.26 6.05 2.94E-9 Box Plot
THCA rs4273946 chr9:100547627 G/C EML5 chr14:89078775-89259096:- 0.3 7 8.86E-12 Box Plot
THCA rs4273946 chr9:100547627 G/C EPDR1 chr7:37723446-37991543:+ 0.32 7.19 2.45E-12 Box Plot
THCA rs4273946 chr9:100547627 G/C GGT5 chr22:24615622-24641110:- 0.27 6.14 1.74E-9 Box Plot
THCA rs4273946 chr9:100547627 G/C LRRC42 chr1:54411750-54433841:+ -0.23 -6.13 1.86E-9 Box Plot